2024

Güllülü, Ömer ; Mayer, Benjamin E. ; Toplek, Fran Bačić (2024)
Linking Gene Fusions to Bone Marrow Failure and Malignant Transformation in Dyskeratosis Congenita.
In: International Journal of Molecular Sciences, 2024, 25 (3)
doi: 10.26083/tuprints-00027184
Article, Secondary publication, Publisher's Version

Schmidt, Michael ; Schroeder, Indra ; Bauer, Daniel ; Thiel, Gerhard ; Hamacher, Kay (2024)
Inferring functional units in ion channel pores via relative entropy.
In: European Biophysics Journal, 2021, 50 (1)
doi: 10.26083/tuprints-00023470
Article, Secondary publication, Publisher's Version

2023

Kunzmann, Patrick (2023)
Development of a programming library for general bioinformatics.
Technische Universität Darmstadt
doi: 10.26083/tuprints-00024784
Ph.D. Thesis, Primary publication, Publisher's Version

Scheithauer, Lina ; Karagöz, Mustafa Safa ; Mayer, Benjamin E. ; Steinert, Michael (2023)
Protein sociology of ProA, Mip and other secreted virulence factors at the Legionella pneumophila surface.
In: Frontiers in Cellular and Infection Microbiology, 2023, 13
doi: 10.26083/tuprints-00023383
Article, Secondary publication, Publisher's Version

Wack, Julia S. ; Brahm, Kevin ; Babel, Philipp ; Dalton, James A. R. ; Schmitz, Katja (2023)
Effect of macrocyclization and tetramethylrhodamine labeling on chemokine binding peptides.
In: Journal of Peptide Science, 2023, 29 (7)
doi: 10.26083/tuprints-00024298
Article, Secondary publication, Publisher's Version

2022

Keul, Frank ; Hamacher, Kay (2022)
Consistent Quantification of Complex Dynamics via a Novel Statistical Complexity Measure.
In: Entropy, 2022, 24 (4)
doi: 10.26083/tuprints-00021285
Article, Secondary publication, Publisher's Version

Kunzmann, Patrick ; Anter, Jacob Marcel ; Hamacher, Kay (2022)
Adding hydrogen atoms to molecular models via fragment superimposition.
In: Algorithms for Molecular Biology, 2022, 17
doi: 10.26083/tuprints-00021427
Article, Secondary publication, Publisher's Version

Kunzmann, Patrick ; Hamacher, Kay (2022)
Biotite: a unifying open source computational biology framework in Python.
In: BMC Bioinformatics, 2022, 19
doi: 10.26083/tuprints-00012854
Article, Secondary publication, Publisher's Version

Kussel, Tobias (2022)
Graph Structures in Privacy-Preserving Biomedical Analyses.
Technische Universität Darmstadt
doi: 10.26083/tuprints-00021828
Ph.D. Thesis, Primary publication, Publisher's Version

Schmidt, Michael ; Hamacher, Kay (2022)
hoDCA: higher order direct-coupling analysis.
In: BMC Bioinformatics, 2018, 19
doi: 10.26083/tuprints-00012863
Article, Secondary publication, Publisher's Version

2021

Bauer, Daniel (2021)
Computational Study of Voltage-gated Sodium/Potassium channels.
Technische Universität Darmstadt
doi: 10.26083/tuprints-00018611
Ph.D. Thesis, Primary publication, Publisher's Version

2019

Boba, Patrick (2019)
Graphenrekonstruktion anhand abhängiger Zeitreihen in biologischen Netzwerken.
Technische Universität Darmstadt
Ph.D. Thesis, Primary publication

Groß, Christine (2019)
In Silico Studies on Proteins for Synthetic Biology.
Technische Universität Darmstadt
Ph.D. Thesis, Primary publication

Jager, Sven (2019)
Development of Computer-aided Concepts for the Optimization of Single-Molecules and their Integration for High-Throughput Screenings.
Technische Universität Darmstadt
Ph.D. Thesis, Primary publication

2018

Keul, Frank (2018)
On Evolution, Structure and Dynamics in Potassium Channels.
Technische Universität Darmstadt
Ph.D. Thesis, Primary publication

2017

Jager, Sven ; Schiller, Benjamin ; Babel, Philipp ; Blumenroth, Malte ; Strufe, Thorsten ; Hamacher, Kay (2017)
StreAM-Tg : algorithms for analyzing coarse grained RNA dynamics based on Markov models of connectivity-graphs.
In: Algorithms for Molecular Biology, 2017, 12 (1)
Article, Secondary publication, Publisher's Version

Keul, Frank ; Hess, Martin ; Goesele, Michael ; Hamacher, Kay (2017)
PFASUM: a substitution matrix from Pfam structural alignments.
In: BMC Bioinformatics, 2017, 18 (1)
Article, Secondary publication, Publisher's Version

2015

Knorr, Sabine (2015)
In Silico Strategies to Modulate DNA Damage Response.
Technische Universität Darmstadt
Ph.D. Thesis, Primary publication

Lengert, Laurin (2015)
Theoretische und experimentelle Methoden zur Verbesserung der Unterscheidbarkeit alternativer Modelle der Proteinrekrutierung.
Technische Universität Darmstadt
Ph.D. Thesis, Primary publication

Weißgraeber, Stephanie (2015)
Hyperpolarization-Activated cyclic nucleotide-gated channels - structure and evolution.
Technische Universität Darmstadt
Ph.D. Thesis, Primary publication

2014

Carbon-Mangels, Miriam (2014)
Intra-host HIV-1 evolution and the co-receptor switch.
Technische Universität Darmstadt
Ph.D. Thesis, Primary publication

2013

Feng, Weijia (2013)
Gamma synchronization and spike timing.
Technische Universität Darmstadt
Ph.D. Thesis, Primary publication

2012

Seehafer, Carsten (2012)
Identifikation von RNA-Motiven durch Datenbankanalysen.
Technische Universität Darmstadt
Ph.D. Thesis, Primary publication