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¹H, ¹³C, and ¹⁵N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein

Korn, Sophie M. ; Lambertz, Roderick ; Fürtig, Boris ; Hengesbach, Martin ; Löhr, Frank ; Richter, Christian ; Schwalbe, Harald ; Weigand, Julia E. ; Wöhnert, Jens ; Schlundt, Andreas (2024)
¹H, ¹³C, and ¹⁵N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein.
In: Biomolecular NMR Assignments, 2021, 15 (1)
doi: 10.26083/tuprints-00023999
Article, Secondary publication, Publisher's Version

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Item Type: Article
Type of entry: Secondary publication
Title: ¹H, ¹³C, and ¹⁵N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein
Language: English
Date: 18 December 2024
Place of Publication: Darmstadt
Year of primary publication: April 2021
Place of primary publication: Dordrecht
Publisher: Springer Netherlands
Journal or Publication Title: Biomolecular NMR Assignments
Volume of the journal: 15
Issue Number: 1
DOI: 10.26083/tuprints-00023999
Corresponding Links:
Origin: Secondary publication DeepGreen
Abstract:

The current outbreak of the highly infectious COVID-19 respiratory disease is caused by the novel coronavirus SARS-CoV-2 (Severe Acute Respiratory Syndrome Coronavirus 2). To fight the pandemic, the search for promising viral drug targets has become a cross-border common goal of the international biomedical research community. Within the international Covid19-NMR consortium, scientists support drug development against SARS-CoV-2 by providing publicly available NMR data on viral proteins and RNAs. The coronavirus nucleocapsid protein (N protein) is an RNA-binding protein involved in viral transcription and replication. Its primary function is the packaging of the viral RNA genome. The highly conserved architecture of the coronavirus N protein consists of an N-terminal RNA-binding domain (NTD), followed by an intrinsically disordered Serine/Arginine (SR)-rich linker and a C-terminal dimerization domain (CTD). Besides its involvement in oligomerization, the CTD of the N protein (N-CTD) is also able to bind to nucleic acids by itself, independent of the NTD. Here, we report the near-complete NMR backbone chemical shift assignments of the SARS-CoV-2 N-CTD to provide the basis for downstream applications, in particular site-resolved drug binding studies.

Uncontrolled Keywords: SARS-CoV-2, Structural protein, Nucleocapsid, Dimerization domain, Solution NMR-spectroscopy, Protein druggability, Covid19-NMR
Status: Publisher's Version
URN: urn:nbn:de:tuda-tuprints-239998
Classification DDC: 500 Science and mathematics > 540 Chemistry
500 Science and mathematics > 570 Life sciences, biology
600 Technology, medicine, applied sciences > 610 Medicine and health
Divisions: 10 Department of Biology > RNA Biochemistry
Date Deposited: 18 Dec 2024 12:54
Last Modified: 18 Dec 2024 12:54
SWORD Depositor: Deep Green
URI: https://tuprints.ulb.tu-darmstadt.de/id/eprint/23999
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